Welcome, Revigo can take long lists of Gene Ontology terms and summarize them by removing redundant GO terms. Read more about Revigo on our Frequently Asked Questions page.

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Please enter a list of Gene Ontology IDs below, each on its own line. The GO IDs may be followed by a separator (space, tab) and value which describes the GO term in a way meaningful to you. The value must have a dot '.' for a decimal separator. For instance, you may provide a p-value (statistical significance), a fold change, enrichment, or some directly measured quantity such as average signal intensity from microarrays, ion count from mass spec, or read count from RNA-seq. You may also provide more than one value per line, although only the first value will be used in GO term selection/clustering. (Hover with a mouse over an icon for additional info)

Examples:

How large would you like the resulting list to be: Warning

If provided, the values associated with GO terms represent:

Advanced options:

Would you like to remove obsolete GO terms: Remove obsolete GO terms

What species would you like to work with:    Species

What semantic similarity measure would you like to use:    Semantic similarity measure

Revigo version 1.8.1 uses these databases which are periodically updated:
  • The Gene Ontology database (go.obo) which is dated Wednesday, January 17, 2024.
  • The UniProt-to-GO mapping database from the EBI GOA project (goa_uniprot_gcrp.gaf.gz) which is dated Friday, February 9, 2024.

If you found Revigo useful in your work, please cite the following reference:
Supek F, Bošnjak M, Škunca N, Šmuc T. "REVIGO summarizes and visualizes long lists of Gene Ontology terms"
PLoS ONE 2011. doi:10.1371/journal.pone.0021800

Revigo is an iProject funded by the Ministry of Science and Education, Republic of Croatia (2008-057) and Ruđer Bošković Institute.
The Revigo project was implemented at the Division of electronics, Ruđer Bošković Institute.

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